Input parameters:

  Query = FBpp0079693 (Len=531)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0079693, Len=531):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRSTVEVKGRLLLTLLLHCLVALEVCGRAGAFTLLSPFSYSSLSFKNLLNSVLLSSNPNLAGGGRNLKSDVLEDASLITP 80  
WD40-rpts                                                                                      

Query       81 KLIRKYGYPSETHTVVTKDGYILEMHRIPKKGAQPVLLMHGILDTSATWVLMGPKSGLGYMLSDLGYDVWMGNSRGNRYS 160 
WD40-rpts                                                                                      

Query      161 KNHTSLNSDYQEFWDFTFHEMGKYDLPANIDYILSKTGYEQVHYIGHSQGTAIFWVLCSEQPAYTQKITSMHALAPIAYI 240 
WD40-rpts                                          (___________________________________________

Query      241 HDMKSPLFRTLVLFLDFLTAATRMLRITEFMPNTKFLVDHSQVVCHDNAMTQDVCSNILFLVAGYNSEQLNKTMLPVMLS 320 
WD40-rpts      ______________________________WD 1______________________________________________

Query      321 HTPSGASIKQLEHFGQLMKSGHFRKFDRGYLRNQLEYNRMTPPDYDLSRVKVPVALYYSVNDLLVSTTGVDRLARELPNV 400 
WD40-rpts      __________________________)                                                     

Query      401 IDKYLVPMERFNHLDFLWAIDVKPLVYNRLVRNVRRVENHRAKLTANLANYLAMQLQRQQLRQQMQQQMMEGLPPNVHLP 480 
WD40-rpts                                                                                      

Query      481 HGLGMEMLARATTFAPVTHPTTTMTMPTTTTENDAEDEVLTTAATATEVPA 531 
WD40-rpts                                                         

1 WD40-repeats found in QUERY=FBpp0079693 (Len=531):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   197-347      3.19  246.23  0.02951       30.0%      9.20

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  197-347    TGYEQVHYIGHSQGTAIFWVLCSEQPAYTQKITSMHALAPIAYIHDMKSPLFRTLVLFLDFLTAATRMLRITEFMPNTKFLVDHSQVVCHDNAMTQDVCSNILFLVAGYNSEQLNKTMLPVMLSHTPSGASIKQLEHFGQLMKSGHFRKFD

   WD40 Template    TGECLRTLSGHT------------SG--------------------VTS----------------------VSFSPD-------------------------------------GKRLV--------SGSE------------DGTIKVWD