Input parameters:

  Query = FBpp0079046 (Len=506)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0079046, Len=506):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MESETKASAEEKQQENPSTVPMDTLDPPPPCGSSKTLKRCLSVPIIRTPPAGKSGKTPMTTRAAAAAALAAKEHEQTPKK 80  
WD40-rpts                                                                                      

Query       81 SQQVVDIQMPNAPSIDCFGKNIHIRSQPNSREVSPAPVFNIFTPRARRYSASYSPLTTAANGATLCLTPRVSQLRQEECA 160 
WD40-rpts                                                                                      

Query      161 DLNSREVNHEREVHREIQISQSWEDLTLVAENWSCKSDEFSNPLQVSLPPTGTTSCSSPSPTNNRAGMRLPYSPSPTRRT 240 
WD40-rpts                                                                                      

Query      241 FATRRSMSPIAMRPSQLGPVKRKFELDDNPTQGSNWSVYSPPPVKKIFTESRGSSPVCQSPSSVCPSPDSGTFDGRLTPK 320 
WD40-rpts                                                                                      

Query      321 LFISKLCTSNSVSGNGINNNSSSSGCPSPVSASPGGVGSGPNLEAAMCLVSGGSQSQSIDEGISIPESETHSCRSRTSSI 400 
WD40-rpts                                                                                      

Query      401 VSTASSSTQVLVNDLVDDATLMDDAKSETSSIGGCSTISIESSSCDSGAKTAATFLNRLVVDSDGGGSPLAQKSFYINKQ 480 
WD40-rpts                   (______________________WD 1______________________)                 

Query      481 GLSGAKKFVVNHERTGAVSKDVPQKL 506 
WD40-rpts                                

1 WD40-repeats found in QUERY=FBpp0079046 (Len=506):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   414-463      3.57  262.12  0.01813       20.0%      9.02

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  414-463    DLVDDATLMDDAKSETSSIGGCSTISIESSSCDSGAKTAATFLNRLVVDS

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGT----------IKVWD