Input parameters:

  Query = FBpp0078886 (Len=329)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0078886, Len=329):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGSCLGSCATAAAAPAHSACTSTSDSTTHSTSSTSSSLTTPPTSWVANSWLWRKNRSAGRQDPEADLLSRTTRQRCQRNG 80  
WD40-rpts      (_______________________WD 1______________________)                             

Query       81 FIYRILRLKKRQQCPSFLDKYWEQQPSYAKLPTTAMADIQMQNLDAGKLLNAQTTPSRETEMGLGAYQRMANSRASSSLD 160 
WD40-rpts                                                                                      

Query      161 LEWEHEYSQLRQYQYQCQQVPKELPPTPPKPRYASLDQLAAANAMATSQGRHMARQARLSCQRHGGSLTRNSCCSSTQNS 240 
WD40-rpts                                                                                      

Query      241 WSHISTPESLEWDVDEEREQQRQLRLEDDNLDDRTLKLLHQIEQLKHHVLQETGDGLSMESAAVEELTEGLQFRATHFAG 320 
WD40-rpts                                                                                      

Query      321 DSQLEAHVS 329 
WD40-rpts               

1 WD40-repeats found in QUERY=FBpp0078886 (Len=329):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-51       3.46  257.67  0.02079       25.0%     -3.67

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-51     MGSCLGSCATAAAAPAHSACTSTSDSTTHSTSSTSSSLTTPPTSWVANSWL

   WD40 Template    TGECLR-----------TLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD