Input parameters:

  Query = FBpp0077727 (Len=700)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0077727, Len=700):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLLRRCFLFPFPAVRLVRRSLHRKHDHIVLHPEIRQALQLQKPVVALESTIITHGMPMPENVVTALAVEEQVRQNGAIPA 80  
WD40-rpts                                                                                      

Query       81 TIGILDGRIKVGLTREELTSLAEKPRDQVIKCSRRDLPFVVSRRQSGGTTVAATMIIAHRVGIHVFATGGIGGVHRDGHE 160 
WD40-rpts                                                                  (___________________

Query      161 SMDVSADLTELGRTPVAVVCSGVKSILDIPRTLEFLETQGVCVASFDSPGGVFPDFYTRDSGCTVPYNLKSAQEAAELLR 240 
WD40-rpts      _______WD 1__________________________)                                          

Query      241 SWRELKMESGLVIGVPIPEEFAADKFKIEEAIKEATAQARAQGISGKEVTPFLLAAIAKITEGRSLKSNIALIKNNAKVA 320 
WD40-rpts                                                                                      

Query      321 AQIAASLCDVSTKLESPVQKAIDKKPLVVGASILDLSFKVDDQKRDMKLDGATYSAVAKQAAGGVGRNIAEGIYKLYGDV 400 
WD40-rpts                                                                                      

Query      401 NLISAVGNDQMGQTLLQMMPKALKRGLIVADNHNTSLCSLIFDKFGDCKLILGNMEIHQSITAETLQAHHQLFREAPLII 480 
WD40-rpts                                                                                      

Query      481 MDSNISEQAMASILQQAQINKIPVFFEPTDMFIAGKPFKLLPELTKNIRLIKPNMQELKTITEAITGETVKWNPETKQPQ 560 
WD40-rpts                                                                                      

Query      561 TELVQQAKSLIKKIDSHFNCIIATLSDHGVLLSYRGDAENDARLLLDVSKPTPPHSTRFYPAPMVHNIVNVSGAGDSFCA 640 
WD40-rpts                                                                                      

Query      641 GFITALLRGRSLDECIAGGFVAAERALQSESAVPATYFSNQESFESRYKHTARIIQQQSI 700 
WD40-rpts                                                                  

1 WD40-repeats found in QUERY=FBpp0077727 (Len=700):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   141-198      3.77  270.58  0.01397       27.5%     16.94

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  141-198    VGIHVFATGGIGGVHRDGHESMDVSADLTELGRTPVAVVCSGVKSILDIPRTLEFLET

   WD40 Template    TGECLRTLSG----HTSGVTSVSFSPD----GKRLVSGSEDGTIKVWD----------