Input parameters:

  Query = FBpp0077450 (Len=487)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0077450, Len=487):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MAKRQTWEQMRQIFVQAVNAVHPEKVFADFQKFDLRPQIGENATDISIKLNGERQDISGKTCHIVGFGKAVLGMANKVQQ 80  
WD40-rpts                                                                                      

Query       81 DLGATSAGGVLSVPVNTLKQFQQPVAPGLVVHEGAANNLPDENALKAAREIKQLAEKMTAQDILFVFISGGGSALLPLPR 160 
WD40-rpts                                                                                      

Query      161 SPLTLEDKRSIADKLMKRGASIQEINAVRIACSDIKGGRLARLAGQAGLLVTFVLSDIIGDPLELIACGPTIQPEAAASP 240 
WD40-rpts                                                                                      

Query      241 SDILKKHHVWEELSPEIRRVFEQPEEQKNTSLPEHKVFVVGSNVIATSTAAHEAERLGYIPCVLSCAVQGDVAQVAGDYQ 320 
WD40-rpts                                                                                      

Query      321 RLLHGIQEAKQHGILDPQLREKYAFGERSYPTFRRALEDHMSSKKPLFLICGGEPVIKVSGHGLGGRSQHLALLMSQALH 400 
WD40-rpts                                                         (____________________________

Query      401 RDEAMRDCTFLSAGTDGIDGPTDAAGAFGDSSVVESYLGDHTLDELAETLRNCDSYNFYKNLAQGEHHVLTGHTGTNVMD 480 
WD40-rpts      ___WD 1______________________________)                                          

Query      481 LHFLVVP 487 
WD40-rpts             

1 WD40-repeats found in QUERY=FBpp0077450 (Len=487):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  9   372-438      3.44  256.69  0.02142       27.5%     12.49

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  372-438    GGEPVIKVSGHGLGGRSQHLALLMSQALHRDEAMRDCTFLSAGTDGIDGPTDAAGAFGDSSVVESYL

   WD40 Template    TGECLRTLSGHTSGVT-------------------SVSFSPDGKRLVSGSEDGTIKVWD--------