Input parameters:

  Query = FBpp0076695 (Len=1229)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0076695, Len=1229):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSELKAPSLQSLLESERGSTDSLLAESLQLDFEDLDDAEFAIPPTDVLPTLEAVLSEFEADSDVASEFGMPVPHATPTPS 80  
WD40-rpts                                                                                      

Query       81 IGEDSTIRTDGRGGGGSIMRYTLLHGISAQLSSAAERVNAGAASSCAVAAFIAIGTSHGHILNFDVTQTLRWAHQDKHGQ 160 
WD40-rpts                                                                       (______________

Query      161 GAVASLAFNADSTRLLAGFSRGLVAMLDTHTGDVLRELFDVITPNTGVLHVKWTSRSSLALCADAGGSVWSLSFTRKLGI 240 
WD40-rpts      _____WD 1__________________)                                                    

Query      241 RGCQSRCLFSGARGEVCAVEPLIMDSQGRHELDQYCIVALATLSKYFIVTVRPRLRVIKYHVLQGPPDCLPLLAWHLVLI 320 
WD40-rpts                                                                                      

Query      321 QAADTSRSVDPVIVVGRGNQLFFHQLFVSNGRITLLYLRHVQLQGSLLSAHWLGPKCVASLDTAEILHLVDVRSSKELEC 400 
WD40-rpts                                                                                      

Query      401 MDMANAGLVYGSAQFKGLATGGNVSPAFALAGSNACYNSVVSRGTQLYVLGARSLHIIGVRTWSERISFLVKHHRWQEAC 480 
WD40-rpts                                                                                      

Query      481 QLALDGYIASVDRPRKRAQAKERIIMLFKEYIANSARAPEYCLGAIVNCLITVGELDLLWTQLWEKLHNSSTELFLQHIS 560 
WD40-rpts                                                                                      

Query      561 EHIEKETIHSVNPVISQALVDYWLEHSPAKLEQLILKLDWMCLDLNQVLKAVKKHRLFRAQIYLNTQALNDYTAALTELL 640 
WD40-rpts                                                                                      

Query      641 PLVTPDETDLGNCLLVYVSSCLAGREYPSGEIPVELVHQVKHDVLRCLTSQHSKENAGDELPYPYLRALLKFDTRETLNV 720 
WD40-rpts                                                                                      

Query      721 ISLAFQEREFSNELGISHRKRIINLLLEIMSPENATWAEIGCLLNFIAQQISMQCLPRDRQLLERVLSHLAQEEIANESS 800 
WD40-rpts                                                                                      

Query      801 RQHSERENAWHELLSSNCLAEISSDEEQLRLAEKAKCYCVVEYLLEKLERYDTILDSYIRNEARHETMFAYMERHVASPK 880 
WD40-rpts                                                                                      

Query      881 RSIFRQLKRNLRELLTINAKETTRLLSLHYPEKINELLDNLRREENLLYLFLKCLNDRKSELEASQMELLLELYCKMESS 960 
WD40-rpts                                                                                      

Query      961 STVEEFLRSNSGYRLENAIAIAESHHLNRSVIYLYEKQESYAKAFELSMELLKSAAGEEAAKEAQTISALLARSVETLPA 1040
WD40-rpts                                                                                      

Query     1041 QELERCWFALLQYILPHQELQSITKSLLHEASQHIDLHNLVQLIMNTHNVSTSFGDIKDLLMGMLDSSRHKTEALRASAG 1120
WD40-rpts                                                                                      

Query     1121 ALCQDLHLKFVKRYQHAHRGLWVTTTKCSMCRQRLYDHSQVLIFGGCGHGIHEQCMEESETQFEECPRCFTAIPDQSIGL 1200
WD40-rpts                                                                                      

Query     1201 PRPNKNLISISSSLEMGALQLKAPPRRFI 1229
WD40-rpts                                   

1 WD40-repeats found in QUERY=FBpp0076695 (Len=1229):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   146-188      4.64  306.23  0.00464       27.5%     53.25

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  146-188    VTQTLRWAHQDKHGQGAVASLAFNADSTRLLAGFSRGLVAMLD

   WD40 Template    TGECLRTL---SGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD