Input parameters:

  Query = FBpp0075251 (Len=451)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0075251, Len=451):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDVLSHYSSPIVEFPATQPLEKQHALVDNCTGTDPPPPSQDAATGTQEKLHVATQTEQRVVSSKDVEYDERALAKWLRQI 80  
WD40-rpts                                                                                      

Query       81 CPMVERELMNPTPLMEDLTMSQCRLEEKLQVYTYQKLIMGGAENSQGLAIWLCVHTNNAPVLVATTVAPHDDWCEHVDQQ 160 
WD40-rpts                                                                                      

Query      161 LKLFVPQRMSVGNLVIYTEAKTLPLKSCLRSLCTNPFNKTMFAGSTMDGELFIWLYEQARGSDSSVDIKQLYSVSSTQGA 240 
WD40-rpts                       (________________WD 1________________)                         

Query      241 AVALDWPREHLLLACFANGSVRQWDLSRQMALDWEYTLPATVSSEPTAMVTLGLDDFVVGTNDGGVYRCWNTGRQTAAIK 320 
WD40-rpts                                                                                      

Query      321 QIKLLALRRHRFMVSTLLRTEMEGNLFVLSCDLSGQAFYHDMRLVDEDMAQLIVQIPLPFKNVIACSRDGNIIFCPANDG 400 
WD40-rpts                                                     (_________________WD 2___________

Query      401 SLEYYRVSDGAHAHVKGGLRGKGSLIRSSDNGRWLIAGLYGDEFQIFYVEH 451 
WD40-rpts      _____)   (_________________WD 3________________)   

3 WD40-repeats found in QUERY=FBpp0075251 (Len=451):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   178-215      2.82  231.00  0.04693       20.0%     26.67
  WD 2:  Seg 22   368-406      2.92  235.35  0.04113       12.5%     41.78
  WD 3:  Seg 26   410-448      3.99  279.55  0.01059       15.0%     40.41

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  178-215    TEAKTLPLK---SCLRSLCTNPFNKTMFAGSTMDGELFIWL
   WD 2  368-406    -DMAQLIVQIPLPFKNVIACSR-DGNIIFCPANDGSLEYYR
   WD 3  410-448    -GAHAHVKGGLRGKGSLIRSSD-NGRWLIAGLYGDEFQIFY

   WD40 Template    TGECLRTLSGHTSGVTSVSFSP-DGKRLVSGSEDGTIKVWD