Input parameters:

  Query = FBpp0075105 (Len=608)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0075105, Len=608):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MENETEALDPEVYADETSTDDSSGDDEVILNPVEGLQPAVEIDEQRDQPGENAEPEQPRVPPLILVDPPHLPSPPRNSRR 80  
WD40-rpts                                                                                      

Query       81 NQGEEQEVISLETPSPPKKRKRLSAAADKSLKKSPEGKPIVVDDEDDGMTCPICLDSWEMSGEHRLVSLRCGHLFGESCI 160 
WD40-rpts                                                                                      

Query      161 RRWLNESHRQSSVKVCPQCKTKATFRDIRHLYAKRIQMLDTDIREQLEAERRRTHTLTTELATAKLANTLTTEKLILLQK 240 
WD40-rpts                                                                                      

Query      241 DYERLKELVRAGGGRGAFGGDASGQKSIQQLATYRLYMEKNFEITRDPGCRVLLYSAKHSMLVASQKSAQNLFPGYGVRF 320 
WD40-rpts                                                                                      

Query      321 IDPPTFKPLQFLHTSALLIRDIAFSDSQHLLTVASRELKIKIFDIRTRLCSSMFTAHDKMLWSCALDRNEREHFLYGGDL 400 
WD40-rpts           (_________________WD 1________________)   (__________________WD 2__________

Query      401 RGGVYIYDLRFPENILCEFQAEVNLSPVIHIAPVQPNKIFTSGGFLVCQLTALTFYEYAAASDTAVPTRLNVEGPFLSMQ 480 
WD40-rpts      _______)                                                                        

Query      481 YDAVQDTVLISARSNPNFPQSRFILGRMDKIDGTPVLKVKATIYGSKATPVMTRPTQLAVEDNTLVVGYLQDSKQLMMHD 560 
WD40-rpts                                                                                      

Query      561 VRREERVQTMPVNEVIYDICPVATQAGSYLAALTDNKCRVYKVNSSMR 608 
WD40-rpts         (_________________WD 3________________)      

3 WD40-repeats found in QUERY=FBpp0075105 (Len=608):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  6   326-364      6.34  376.50  0.00052       22.5%     44.91
  WD 2:  Seg 10   368-408      5.25  331.51  0.00212       17.5%     47.32
  WD 3:  Seg 25   564-602      3.53  260.39  0.01911       10.0%     42.93

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  326-364    FKPLQFLHTSALLIRDIAFSDSQHL--LTVASRELKIKIFD
   WD 2  368-408    RLCSSMFTAHDKMLWSCALDRNEREHFLYGGDLRGGVYIYD
   WD 3  564-602    EERVQTMPVNEVIYDICPVATQAGS--YLAALTDNKCRVYK

   WD40 Template    GECLRTLSGHTSGVTSVSFSPDGKR--LVSGSEDGTIKVWD