Input parameters:

  Query = FBpp0074671 (Len=190)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0074671, Len=190):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MGKQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTI 80  
WD40-rpts      (__________________________________________________________________WD 1_________

Query       81 DFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMKMPEDESTPEKRTDKIFRQMDRNK 160 
WD40-rpts      ________________________________________________________)                       

Query      161 DGKLSLEEFIEGAKSDPSIVRLLQCDPQSH 190 
WD40-rpts                                    

1 WD40-repeats found in QUERY=FBpp0074671 (Len=190):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-137      3.02  239.50  0.03625       27.5%     -15.05

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-137    MGKQNSKLKPEVLEDLKQNTEFTDAEIQEWYKGFLKDCPSGHLSVEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFLCALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEMLEIVTAIYKMVGSVMK

   WD40 Template    TGECLRTLS-------------------------------GHTS-----------GVTSV------------SFSPDGKRL-----------VSGS---------------EDGTIK-----------------VWD