Input parameters:

  Query = FBpp0074613 (Len=211)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0074613, Len=211):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRYAAVLVEVGGTHRCLPLDSDGDLNIVASFDRRGKHIYTGNAKGKILVLDAETFEVVASFRIIVGTSSATAVKSIEFAR 80  
WD40-rpts                  (_________________WD 1________________)        (_________________WD 

Query       81 RGDAFLINTSDRVIRVYDSKEIIILGKDGEPEPIQKLQDLVNKTTWKKCCFSGDGEYICAGSARQHALYIWEKSIGNLVK 160 
WD40-rpts      2________________)       (_____________________WD 3____________________)        

Query      161 ILHGTKGELHKQKRIRSFLERLAKDVPRIKNHLTLPNRFLFSSYRYYIRTI 211 
WD40-rpts                                                         

3 WD40-repeats found in QUERY=FBpp0074613 (Len=211):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2    13-51       8.23  454.51  4.7e-05       25.0%     55.17
  WD 2:  Seg  6    60-98       7.77  435.72  8.3e-05       20.0%     49.31
  WD 3:  Seg 11   106-152      5.51  342.18  0.00152       17.5%     51.60

Multiple sequence alignment of 3 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   13-51     -TH------RCLPLDSDGDLNIVASFDRRGKHIYTGNAK-GKILVLD
   WD 2   60-98     -SF------RIIVGTSSATAVKSIEFARRGDAFLINTSD-RVIRVYD
   WD 3  106-152    GKDGEPEPIQKLQDLVNKTTWKKCCFSGDGEYICAGSARQHALYIWE

   WD40 Template    TGE------CLRTLSGHTSGVTSVSFSPDGKRLVSGSED-GTIKVWD