Input parameters:

  Query = FBpp0073847 (Len=432)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0073847, Len=432):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSKPSYKVADISLAEWGRKAIIIAENEMPGLMACRKKYGPSKPLKGARITGCLHMTVQTAVLIETLVELGAQVQWSSCNI 80  
WD40-rpts                                                                                      

Query       81 FSTQDNAAAAIAATGVPVYAWKGETDEEYMWCIEQTLVFPDGQPLNMILDDGGDLTNLVHEKFPQYLKNIKGLSEETTTG 160 
WD40-rpts                                                                                      

Query      161 VHNLYKMFKEGRLGVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVCCVAGYGDVGKGCAQALKGFGGRVI 240 
WD40-rpts               (__________________________________WD 1________________________________

Query      241 VTEVDPINALQAAMEGYEVTTMEEASKEASIFVTTTGCRDIITSVHLQQMPDDAIVCNIGHFDIEIDVDWLNANAKEKVN 320 
WD40-rpts      __)                                                                             

Query      321 VKPQVDRYTMQSGKHIILLAEGRLVNLGCAHGHPSFVMSNSFTNQVLAQIELWTKSDKYAVGVHVLPKILDEEVASLHLE 400 
WD40-rpts                                                                                      

Query      401 KLGVKLTKLTEKQATYLGVSQTGPFKPDHYRY 432 
WD40-rpts                                      

1 WD40-repeats found in QUERY=FBpp0073847 (Len=432):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   170-243      2.96  236.98  0.03914       20.0%     19.64

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  170-243    EGRLGVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVCCVAGYGDVGKGCAQALKGFGGRVIVTE

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKR---------------------LVSGSEDGT-------------IKVWD