Input parameters:

  Query = FBpp0072475 (Len=827)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (FBpp0072475, Len=827):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRKKQADEIPGFPSLDNDAGTSDRGADILKSKSKKNKSGGFQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVV 80  
WD40-rpts                                                                                (_____

Query       81 AMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCP 160 
WD40-rpts      ______________________________________WD 1______________________________________

Query      161 DVIVATPGRFLHLCVEMDLKLNSIEYVVFDEADRLFEMGFGEQLNETLHRLPSSRQTVMFSATLPKLLVEFARAGLNDPV 240 
WD40-rpts      _____)                                                                          

Query      241 LIRLDVESKLPDALALKFLYCRPDDRYTALVVLLKYVIPVQSQTVVFAGTQHHVELISYILTEAGISNASVYSSLDPAAR 320 
WD40-rpts                                                                                      

Query      321 KINTAKFVNKKVSVLIVTDVAARGIDIPSLDFVVNLHFPGKPKLFVHRVGRCARAGRTGTAYSIVSTDDTAHLLDLHLFL 400 
WD40-rpts                                                                                      

Query      401 NRPFNIHDSSALGTIPQDLLEEEHLTVTDIKKSHHIAGVLRTSENAYKKYLSSRPVASTDANARVKKIKFFALKPLEDFF 480 
WD40-rpts                                                                                      

Query      481 TAAPVLAQAAEASGQSTESQAKVSAAERKLQEEKHDILVKMRSFRPGGTVFELNTTQKSTQFIVMKEKRMQHAEVINKFR 560 
WD40-rpts                                                                                      

Query      561 QQRAEEDIDEEKKTIEALNPSSGRMPTADEEAISSTFNKVVAPKRLQNMDALYKDKPKKKKRKINSKDEDHYVPYQSADK 640 
WD40-rpts                                                                                      

Query      641 HTEDGLAINNFERQAQNAEFSVSDRDLSQEVKHKPGLKKWDRIKKKMVSVQDPRANKIRTESGAWIPASFKTGRYAEWKE 720 
WD40-rpts                                                                                      

Query      721 KSKIEDQLQRENAGSDDENAKPLSHAQRYPVSRHARHNLKLELKKRLTGNDKEMRRPEQIVKSRMRLEFIKKRNEENAER 800 
WD40-rpts                                                                                      

Query      801 KSENRKRSMRKTQRPKAQSTGGSKRRK 827 
WD40-rpts                                 

1 WD40-repeats found in QUERY=FBpp0072475 (Len=827):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    75-166      3.25  248.76  0.02732       22.5%     37.97

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   75-166    EGRDVVAMAKTGSGKTACFLIPLFEKLQRREPTKGARALILSPTRELAVQTYKFIKELGRFMELKSILVLGGDSMDSQFSAIHTCPDVIVAT

   WD40 Template    TGECLRTLSGHTS---------------------GVTSVSFSPD--------------------GKRLVSGSED-----------GTIKVWD