Input parameters:

  Query = F59F5.7 (Len=896)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F59F5.7, Len=896):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNLFYFSKANDFLFMILFLLIYTVEIRGDEQSRPVAIVPWSQYKRRLGHLKEGSLAYQTETEPLKTAATSSSSASNSYFG 80  
WD40-rpts                                                                                      

Query       81 SYEKEDLSLKQLPRFDENEPRSRSHSAGTKPRSQYGNVIRPQLRGKLPADPSDFMKIPKTNQVEYLMQRELDMQTLVPPE 160 
WD40-rpts                                                                                      

Query      161 RPQSSSKMSSLPSRHTLGVEESQTFNMKHKIASVAIPNGVPMTAGNWETGQPHYSGDRRLHAASTFVGSPSIPYATNYNG 240 
WD40-rpts                                                                                      

Query      241 ELASALLQQKNVEPNITSQPQATFEKMLANEMSVEKLSKLANNLLGFNNGGGTGESGSGTGSLFETMTSVLSGGNRKVPT 320 
WD40-rpts                                                                                      

Query      321 SSAAHDDQSQYAPASAGRPQTSMLTQFFNKASDALKDSFAKKVFENKENKNIDPLALPIPEPEKKEKVSKEVENTLKLLS 400 
WD40-rpts                                                                                      

Query      401 TMPDEQRKMLESAIKDGEIDADSPLIKNLVKNDVTEESKKEKANRLIEWIRSNRPSTKTPESGIPKNVPYYGKYLGSLAE 480 
WD40-rpts                                                                                      

Query      481 TPTTKKQKSPAGALWLVDERKIIVTRFVFESGSLLNENVTFWLGPKTPTGNFVEDFMPSENGFYIKPKPIEMSAFASREL 560 
WD40-rpts                                                                                      

Query      561 PPIEAKPRTNVAAVKLFEGIPPIVANVTRVKRDSNVVNATAKPIELFVEVSTWYQINCMKSNIQGGIMEVRPGNGVLKLE 640 
WD40-rpts                                                                             (________

Query      641 KQADTVTSMSSVPGGLRLRQPEFDPVDDKVPQPLQWFEGFQPLMLTLPPSKVFGDIHWVSLRDHKRNINVASVILPNGPL 720 
WD40-rpts      _________WD 1_________________)                                                 

Query      721 VQIPKVVRLRALSPNSLQFNISSGPIEILDVKTIRINDFSFQHDDDSVWLMVGSELLPNLNGKIVPLFDENTRKFDCQGL 800 
WD40-rpts                                                                                      

Query      801 MSYHGETIVFRLPGELTWKDVFWFSSHLCLILNGDSFLFLKKFKISYNVQELASILVYSKKRFVSYSEIYLPQSDMHLLP 880 
WD40-rpts                                                                                      

Query      881 DLSSIASPTCQYNPTP 896 
WD40-rpts                      

1 WD40-repeats found in QUERY=F59F5.7 (Len=896):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10   632-671      3.27  249.66  0.02657       27.5%     -2.27

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  632-671    PGNGVLKLEKQADTVTSMSSVPGGLRLRQPEFDPVDDKVP

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD