Input parameters:

  Query = F59B2.6 (Len=489)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F59B2.6, Len=489):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSECSASTSQLSTFCVNEIPWKLVPQTCDEFSEYEFIDEKYRRLSDVESFVWKWSPCGRYGIDLPGGRDVINQQLRDRMA 80  
WD40-rpts                                                                                      

Query       81 VFDLHTNKWTLYTMDRGAFEIPRVCFLYWARNDIIGTITLVKDYEAGPDDEIPLKFKQSFFYVSHETQTLVYSGSCKYRT 160 
WD40-rpts                                                                                      

Query      161 NKTIVASYWYHIFENRRGEPFIDHNNYLWLVFSNGVDSLILLPFIPTSTCFKAKCVSFDMNDIVSQFTGIRVFLDPFVSS 240 
WD40-rpts      (___________________WD 1___________________)                                    

Query      241 HYVPWVYRNDVNFFIRIDSHSFIEEQNRDYGLDPQIDNPETKPHRGVFQLRVNLKDVIEKGEKDAIHAVNPETIETRFNR 320 
WD40-rpts                                                                                      

Query      321 GDIELWRKISDELRQEHQSIAQHGKMVVVQRWSHFTVDMGLSKKMRTRVADLDARDYCCSHKPRNSSFCCIDLDSERIKA 400 
WD40-rpts                                                                                      

Query      401 VDALILGTDVVLPHPSGSVFLFRYKENYGMSYCELPFFQPLSLKLKCIQVLKESVEIDPSYYRIKCCLKMQEELEKETAE 480 
WD40-rpts                                                                                      

Query      481 NLCTINIQQ 489 
WD40-rpts               

1 WD40-repeats found in QUERY=F59B2.6 (Len=489):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 10   161-204      3.02  239.57  0.03617       12.5%     17.78

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  161-204    NKTIVASYWYHIFENRRGEPFIDHNNYLWLVFSNGVDSLILLPF

   WD40 Template    TGECLRTLSGH----TSGVTSVSFSPDGKRLVSGSEDGTIKVWD