Input parameters:

  Query = F58E6.11 (Len=188)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F58E6.11, Len=188):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MQIFESLNEDDTIKLRSETTTSNSKANAHAKIFYSQIGFTVITFILGSRALLSSHIPFFSWLPALLLLFDSTLAFASLLY 80  
WD40-rpts                                                                                      

Query       81 LDFSRENTTCYLRLVLSLVILRLSCSVVLVAELFLPHSDPTVSIPLIIVSIVHSAFSLLSSVQVHSLSFSNREKIAEDLE 160 
WD40-rpts                              (_______________________________________WD 1____________

Query      161 DAIKMQPYLGSTTTLVTNLDDEVHVDLI 188 
WD40-rpts      __________________________) 

1 WD40-repeats found in QUERY=F58E6.11 (Len=188):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   105-187      3.07  241.34  0.03427       20.0%     20.78

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  105-187    CSVVLVAELFLPHSDPTVSIPLIIVSIVHSAFSLLSSVQVHSLSFSNREKIAEDLEDAIKMQPYLGSTTTLVTNLDDEVHVDL

   WD40 Template    TGECLRT--LSGHTSGVTSVS-------------FSPDGKRLVSGSE----------------------------DGTIKVWD