Input parameters:

  Query = F54F7.2 (Len=322)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F54F7.2, Len=322):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MLLLRIIVSGICLVALAHSYREEPYHTLKVPFSSAKGGQISKEVFIEFYSHTVLTEQDVALRMTVLSSEEVSMSVDKCGK 80  
WD40-rpts                                                                                      

Query       81 RLFETSEDIKNATYLFTREWIDTILTGIYEICTVKNEYQIDITIDCKGPCNGTIIFSISNQQPENIQDKKSNPAEGSIPF 160 
WD40-rpts                                                                                      

Query      161 ATSGDSVPVNVSSDIGLVIEAAFMNPSVRVEIEVEYSTPYTMVIGKCGLTMLRLEGNGELKKHNFGWDETKLLRLVKATQ 240 
WD40-rpts                                                    (____________________________WD 1_

Query      241 CPGDNSDTIDYVMSSEKAGSGTLKFSMMRHQSKMDRHPANMFDTMELARGVPKHHPSDEKTPTQSSNVVRTFFVLLLVLI 320 
WD40-rpts      __________________________)                                                     

Query      321 GY 322 
WD40-rpts        

1 WD40-repeats found in QUERY=F54F7.2 (Len=322):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg 12   207-267      2.87  233.01  0.04416       22.5%     17.36

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  207-267    CGLTMLRLEGNGE-LKKHNFGWDETKLLRLVKATQCPGDNSDTIDYVMSSEKAGSGTLKFSM

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPDG---------KRLVSGSED-------------GTIKVWD