Input parameters:

  Query = F52H2.5 (Len=283)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F52H2.5, Len=283):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSDGLIDKPKLFVQGMFVTSTSGETADETTMSKIDNIITYGLQAIEHFLEKNDGQTEHSKLEYKRVVADKEVECNPDGVK 80  
WD40-rpts                                                                                      

Query       81 IVIFVEDIEVPAKLTAFANGNRAEIHIPKSKIDELSEETNIDKLPANEKAAFEMLLNHFLHEMMHMFGAFHSDVGIMSGV 160 
WD40-rpts                                                                                      

Query      161 IQLFNEENRIDLAILLDDHSARIVSETLIGQVLPDPPVATFVYDEKDRSLKFESSAGFHTVMFLNNSYYTNRFYYSVDMN 240 
WD40-rpts          (______________________WD 1______________________)                          

Query      241 FECIVPKDSDWDSLLVQFVYGASLFYKKSSIYNNCDYDRIRRR 283 
WD40-rpts                                                 

1 WD40-repeats found in QUERY=F52H2.5 (Len=283):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  7   165-214      3.44  256.71  0.02141       17.5%     25.26

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  165-214    NEENRIDLAILLDDHSARIVSETLIGQVLPDPPVATFVYDEKDRSLKFES

   WD40 Template    TGECLRTLSGHTSGV----------TSVSFSPDGKRLVSGSEDGTIKVWD