Input parameters:

  Query = F48A9.2 (Len=230)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F48A9.2, Len=230):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MEKDRKNSIELDKNLAENLFLTLNIFFKYFLKNPHSFFVSSPSMRGSHGYPPSRGNYDTYSSPSGGHGQMVINMKTTVTT 80  
WD40-rpts                                                                                      

Query       81 SGGQHNGLVVHSAIQSASPSTSQSSWMSPYSESPSRRLEDSLDMMRSNTSLHRSSPLPIQMVPSTSRETLISVGREGSSR 160 
WD40-rpts      (___________________________________WD 1__________________________________)     

Query      161 RENGYIGTPPKPPSPPPSPIYSFKGRDSPPDEFIQPTKLVLNVFRPQRKLPKSRNNFVPKNLNIEQYKST 230 
WD40-rpts                                                                            

1 WD40-repeats found in QUERY=F48A9.2 (Len=230):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  3    81-155      3.40  255.10  0.02249       27.5%     -6.86

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   81-155    SGGQHNGLVVHSAIQSASPSTSQSSWMSPYSESPSRRLEDSLDMMRSNTSLHRSSPLPIQMVPSTSRETLISVGR

   WD40 Template    TGECLRTLSGHT------------SGVTSVSFSPD-----------------------GKRLVSGSEDGTIKVWD