Input parameters:

  Query = F46F3.3 (Len=126)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F46F3.3, Len=126):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MVDNEWMDKFIPREYKRTHSLSGSDEQDVTKDNNFGYSEQGMKDLDEVGGLVGGGDSDLLGILRPYYSMVEMTANGNKQG 80  
WD40-rpts      (_________________________WD 1_________________________)                        

Query       81 MGQYLHVLPDSSEGDTPIYSVGGSMYGGVEPAGAKLGYMNRPFGKR 126 
WD40-rpts                                                    

1 WD40-repeats found in QUERY=F46F3.3 (Len=126):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-56       2.95  236.46  0.03976       22.5%     -1.14

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-56     MVDNEWMDKFIPREYKRTHSLSG--SDEQDVTKDNNFGYSEQGMKDLDEVGGLVGGGD

   WD40 Template    TGE------CL-------RTLSGHTSGVTSVSFSPDGKRLVSGSED-----GTIKVWD