Input parameters:

  Query = F45H10.1 (Len=569)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F45H10.1, Len=569):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNRLSQFKRSYSLLPQGAQAYIGGKWTASETGNSFDVLNPFNNEVVDRATNCTVKDAEKAVHSALEGFDKWAHTYSAKQR 80  
WD40-rpts                                                                                      

Query       81 GAILHKWFEILVQRETELATLLTKEQGKPLAEARGEIQYSAAYFDWYAGEARRVYGQVVPSAVVNRLHLHTREPIGVVAL 160 
WD40-rpts                                                                                      

Query      161 IAPWNFPTAMIARKAAAALSVGCSAVVKPSGDTPLSALALAQTAEEAGIPAGVFNVITADHSNTAEISKYLCESTDVSAI 240 
WD40-rpts                                                                              (_______

Query      241 SFTGSTPVGKLLLAQSASTVKRVCLELGGNAPLIVFDDADLDVAVNGTMATKFRCSGQTCVSANRIYVHEKIHDQYISKL 320 
WD40-rpts      __________________________WD 1________________________________)                 

Query      321 AAAMKEKLVLGDGLNPKTTQGPLVNQKAVDKCELLLSDALGKGSELICGGKRGEHGTSYEPTLITNVQSNTNIAHTEIFG 400 
WD40-rpts                                                                                      

Query      401 PIASVQKFRDEQEVLEAANNCRVGLAGYVFGRDQSRLQRVARKLEVGMVGVNEGLISCAEAAFGGVKESGIGREGGAQGI 480 
WD40-rpts                                                                                      

Query      481 DEFTNWNCRVAAIPCIYHLPIFFFFHCNFFLTRDEEKWFLGHGRRADKFQRPFILLCCFPPVFFCFSQLFPMLKRFPSKK 560 
WD40-rpts                                                                                      

Query      561 IMYSVGKQR 569 
WD40-rpts               

1 WD40-repeats found in QUERY=F45H10.1 (Len=569):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  8   233-303      3.22  247.83  0.02811       17.5%     19.48

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  233-303    ESTDVSAISFTGSTPVGKLLLAQSASTVKRVCLELGGNAPLIVFDDADLDVAVNGTMATKFRCSGQTCVSA

   WD40 Template    TGECLRTLSGHTSG-------------VT--SVSFSPDGKRLVSGSED----------------GTIKVWD