Input parameters:

  Query = F40F8.4 (Len=195)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F40F8.4, Len=195):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKYLVIFPLLAAFSVALPTASKSNEQLELLVDQIYPDISTYLSKTQIRTLFRALSEVVRKSRTLEQIGKEMIEPTLSTMT 80  
WD40-rpts      (_________________________________________________________________WD 1__________

Query       81 ADQKSESWESIQKAEKAFGGFQQLKVIFFHALDAVQDFMGDAMDKDRAEVTANAKGKTEDEQLALIYEVFRQYFNIEFGQ 160 
WD40-rpts      _______________________________________________________)                        

Query      161 KIMDTVKYSMTEEDWAIATEDAAQYLAVENFNLVY 195 
WD40-rpts                                         

1 WD40-repeats found in QUERY=F40F8.4 (Len=195):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-136      2.83  231.58  0.04613       12.5%      8.93

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-136    MKYLVIFPLLAAFSVALPTASKSNEQLELLVDQIYPDISTYLSKTQIRTLFRALSEVVRKSRTLEQIGKEMIEPTLSTMTADQKSESWESIQKAEKAFGGFQQLKVIFFHALDAVQDFMGDAMDKDRAEVTANAKG

   WD40 Template    TGECL-----------RTLSGHT-------------S----------------------------------------GVTSVSFSPD-----------GKR------------------LVSGSEDG---TIKVWD