Input parameters:

  Query = F40F8.1 (Len=191)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F40F8.1, Len=191):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MHNVVFVLGPPGSGKGTICAKIQENLNYVHLSAGDLLRAERQREGSEFGALIESHIKNGSIVPVEITCSLLENAMKACGD 80  
WD40-rpts      (_________________________________________WD 1__________________________________

Query       81 AKGFLVDGFPRNEDNLQGWNKQMDGKALVQFVLFLSCPVSICIERCLNRGQGRTDDNEESLKKRVETYNQQTFPIIEHFE 160 
WD40-rpts      ______)                                                                         

Query      161 KSGLVREVKSERPVDVVYADVEKVFDAANKK 191 
WD40-rpts                                     

1 WD40-repeats found in QUERY=F40F8.1 (Len=191):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-87       2.81  230.60  0.04750       20.0%     15.17

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-87     MHNVVFVLGPPGSGKGTICAKIQENLNYVHLSAGDLLRAERQREGSEFGALIESHIKNGSIVPVEITCSLLENAMKACGDAKGFLVD

   WD40 Template    TGECLRTLSGHTSG-----------VTSVSFS-----------PDG------------KRLVS-------------GSEDGTIKVWD