Input parameters:

  Query = F32H2.5 (Len=2613)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F32H2.5, Len=2613):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDNTGEGSSDSSGTWERISDNSQSSDNMDPTQWWQKQDDIVISGVSGRFPRCDNVKMFGDMLLAGEDLVTEDSLRWTPGF 80  
WD40-rpts                                                                                      

Query       81 CDLPKRHGKLKVLNKFDAGFFQVTPKQANFMDPQVRLLLEASWEAMVDAGINPTDLRGSKTGVFVGCSASETSGMLTQDP 160 
WD40-rpts                                                      (__________________________WD 1_

Query      161 DTVTGYTLTGCVRSMFSNRISYTFDLQGPSFSVDTACSSSLLALQLAVDSIRQGQCDAAIVAGAHLTLTPTAALQFLRLG 240 
WD40-rpts      ________________________)                                                       

Query      241 MLTDKGSCRSFDESGDGYCRTEGVAAIFIQRKKKAQRLYATVVHAKSNTDGHKEHGITFPSGERQAQLLQEVYSEAGIDP 320 
WD40-rpts                                                                                      

Query      321 NSVYYVEAHGTGTKVGDPQEANAICEVFCSKRTDSLLIGSVKSNMGHAEPASGVCSLTKILLSIERQLIPPNLHYNTPNQ 400 
WD40-rpts                                                                                      

Query      401 YIPGLTDGRLKVVTEPTALPGGLIGINSFGFGGSNTHVILKAADHIAPPITPHPFTKLVTYCGRTQEAVENIFTEIESNK 480 
WD40-rpts                                                                                      

Query      481 DDLYLQALLANQANMPANLLPFRGYMLLDRENNVETLKSITKVPITEARPIYFIYSGMGSQWPGMAIKLMKIPMFDDSLR 560 
WD40-rpts                                                                                      

Query      561 ASSKTLEEFGLDVYGMLCNPDPEQYSNNTMNCMLAITAIQIALTDVLTALGVSPDGIIGHSTGEMGCGYADGGITREQTM 640 
WD40-rpts                                                                                      

Query      641 RLAYHRGTTIMKHTEIKGAMAAVGLTWEQVKEQAPPGVVAACHNGADSVTISGDAEGVATFCAQLKEKDIFAKVVDTSGI 720 
WD40-rpts                                                                                      

Query      721 PFHSPAMLAVQDEMIECMRTAVPEPKPRSSKWISTSIPEDDWESDLAATCSAEYHVHNACSPVLFYEAIQKIPANAVTIE 800 
WD40-rpts                                                                                      

Query      801 MAPHSLMQAILRRSLQKTVTNVGLMNRPKSENDDELESFLGSLGKIYQAGVNIQITELYPGGQYKGVVPKGTPMIGPMWK 880 
WD40-rpts                                                                                      

Query      881 WDHTQDWLTIDGRQVLAGGSGSVASSATYNIDPFATDSKETYLLDHVIDGRVLYPFTGHMVLAWRTLCKLKGLDYTKTPV 960 
WD40-rpts                                                                                      

Query      961 VFENINVFSATILTKPIKLDVVLSPGNGYFEIISDDQVAASGRIYIPEDNQPFYYGKLEDIRTSEIADRIELDTEDAYKE 1040
WD40-rpts                                                                                      

Query     1041 FLLRGYEYGQAFRGIYKTCNSGERGFLYWTGNWVTFLDSLLQTALLAERSDTLRLPTRVRHLRIDPNKHLEHVVEKDGIQ 1120
WD40-rpts                                                                                      

Query     1121 VIELRNDHSTNGCIAGGVECCDLNAHSVARRIQVSGQLYHEKIFFVPHFDHNCLSGHKKTSTILKDYSAVIKQQLYTGFS 1200
WD40-rpts                                                                                      

Query     1201 KWQSAGLLKKLKNGAQIVKALAVLKASQSDVVLDDTVTRFTHDGKCTVLHHIADMFKIEDCEDFEDRVAAKLKSVRGIFE 1280
WD40-rpts                                                                                      

Query     1281 LDRLWAGAVLNDRIVKSLQDICIENSAGHHATMAAVDLVSTDQIRHCIEANSSHPLLETDYTCIGANVDHLDESTLEIIG 1360
WD40-rpts                                                                                      

Query     1361 GKKQKIDLENNFTGHGEVKNLDYVLLDKVISKKADPIAFIEACKHLIRETGFLLVVEVTSQYEIALAIEGLLGNEMVGDA 1440
WD40-rpts                                                                                      

Query     1441 SRKYNQFFTHEQLLDMFKSTGFLICNFQSDPALMTTTYAVRRVSPIPRDPVFIDVDDVKEFNWIEPLQKVSEERLNEPDS 1520
WD40-rpts                                                                                      

Query     1521 KTIWLVSNKCRNNGIVGLGLCFVEENLKINRFRSAFDMSANKEIRDGPPVWNIGDEETKKIVELDLHANDYMDGQWGSMR 1600
WD40-rpts                                                                                      

Query     1601 HIVVKDEDVHVYKDCEHAFINTLTRGDVSSLTWFESPNQYFDSMVKSKATQELCSVYYAPINFRDIMLAYGRLPPDAIPG 1680
WD40-rpts                                                                                      

Query     1681 NFADRECLLGMEFSGRLKDGTRLMGILPAQALATTVMVDRDYAWEVPRDWTLAEASTVPVVYTTAYYALVRRGLMKKGDK 1760
WD40-rpts                                                                                      

Query     1761 ILIHGGAGGVGQAAIAIALAAGCEVFTTVGSAEKREFLKNLFPQLQEHHFANSRSADFELHIRQHTKGRGVNIVLNSLAN 1840
WD40-rpts                                                                                      

Query     1841 EMLQASLRCLARHGRFLEIGKVDLSQNSSLGMAKLLDNVSVHGILLDSIMDPTVGDLDEWKEIARLLEQGIKSGVVKPLH 1920
WD40-rpts                                                                                      

Query     1921 SHSFPADKAEEAFRFMSAGKHIGKVIMEIRPDEGTKVCPPSKISVRAICRTLCHPQHTYLITGGLGGFGLELAQWLINRG 2000
WD40-rpts                                                                                      

Query     2001 ARKLVLTSRTGIRTGYQARCVHFWRRTGVSVLVSTLNIAKKSDAVELINQCTAMGPIGGIFHLAMVLRDCLFENQNVQNF 2080
WD40-rpts                                                                                      

Query     2081 KDAAEAKYYGTINLDYASREHCDKNILKWFVVFSSITSGRGNAGQTNYGWSNSCMERMIDQRRADGFPGIAIQWGAIGDV 2160
WD40-rpts                                                                                      

Query     2161 GVILENMGDNNTVVGGTLPQRMPSCLSSLDNFLSWNHPIVSSFIKAELGSKKNVGGGDLMATIAHILGVNDISQLNADAN 2240
WD40-rpts                                                                                      

Query     2241 LSDLGLDSLMGVEIKQALERDHDIVLSMKEIRTLTLNKLQQLADQGGTGRTALQVNELEMKKDGERDAELNTAEMLEQQM 2320
WD40-rpts                                                                                      

Query     2321 NQLFKMRVDVNDLDPQDIIVKANKVEEGPITFFVHSIEGIATPLKKVMNKCEFPAYCFQSTKNVPQTSIEDVAKCYIREM 2400
WD40-rpts                                                                                      

Query     2401 KKIQPSGPYRLVGYSYGACIGFEMANMLQESDGRDAVERLILLDGSHLYMQTYRNVYRMAFGVTGDSLVNNPLFESEIMC 2480
WD40-rpts                                                                                      

Query     2481 AMTLRFANVDYKKFRFELLQQPGFKARVQKVVDQVMLTGLFKSPETVAFACEAMHSKFLMADKYKPRRNFGGHITLIRAE 2560
WD40-rpts                                                                                      

Query     2561 QGAAREEDVGEDYGVAAVSEDCEVLKVKGDHDTFVQGKSSSVTVEHINRIILQ 2613
WD40-rpts                                                           

1 WD40-repeats found in QUERY=F32H2.5 (Len=2613):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  2   129-185      2.78  229.69  0.04885       17.5%      1.81

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  129-185    AGINPTDLRGSKTGVFVGCSASETSGMLTQDPDTVTGYTLTGCVRSMFSNRISYTFD

   WD40 Template    TGECLRTLSGHTSGVTSVSFSPD------------GKRLVSGSEDGTIKV-----WD