Input parameters:

  Query = F32B4.6 (Len=297)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F32B4.6, Len=297):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNSKLLNLARRFPHSDSTSSMMLANLTFGNMRSKGTPLILVPGLFGTKENWIQVGKDLSQRLGCMVFAVENRNHGSFSKA 80  
WD40-rpts                                                                                      

Query       81 ASMTYEEMADDLVGFIDWVRKITGEDKVNLHGHSMGGKAVTQLATTPEYSSRIKSLIVEDMSPLGYPLKRAEYLECIKQM 160 
WD40-rpts                            (_____________________________________________WD 1________

Query      161 IATDMNKSRSEVMAELGEKVSKVLLYQFVRGNLGEDVNGKAHWICNLNVIDETYIYLLSHDIRFGVFDGPTLFQRAPGSG 240 
WD40-rpts      _____________________________________)                                          

Query      241 FLPAAHKNRVEKMFPMVQFAETAWSNHWIHADDPKFFVDSICEFLEEPDQLGMRAYI 297 
WD40-rpts                                                               

1 WD40-repeats found in QUERY=F32B4.6 (Len=297):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  4   103-198      2.95  236.40  0.03984       27.5%      6.19

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  103-198    TGEDKVNLHGHSMGGKAVTQLATTPEYSSRIKSLIVEDMSPLGYPLKRAEYLECIKQMIATDMNKSRSEVMAELGEKVSKVLLYQFVRGNLGEDVN

   WD40 Template    TGECLRTLSGHT-------------------SGVTSVSFSPDGKRLV----------------SGS------------ED---------GTIKVWD