Input parameters:

  Query = F32A6.3c (Len=901)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F32A6.3c, Len=901):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDETHENEASDSFDPVFENSYHDDVTFNTEDDDEPPLEPRFKYERLKGEETLPFMKTATFTSIDLHDKFIAIGTATGLIY 80  
WD40-rpts                                                   (________________WD 1______________

Query       81 ILDHHGYGNFDSVPPLKPHRCAVSKVKFDETGSYVLSCANDSKIVVSGVGNDKLCCTINIQVMPKSIYFSPDFIRQQSGH 160 
WD40-rpts      __)(____________________WD 2___________________)                                

Query      161 CFIMGERNLVLYEKRMFQYKASSLYSGSERDGFIHCCSWNENLIAFTNDTGTRVYERGAERIITSVQPSHDVDRVRSSRS 240 
WD40-rpts                                                                                      

Query      241 PPKHTWMPENNLVIGWADTVTILKIRDDDGVKKGEVHHIFHVSMFICGISYIPESGIDNMELFLVGLQLEGEDFDDCASV 320 
WD40-rpts                                                                                      

Query      321 ISTVTTLTALESSACTILKTSVIRPLGLKEFELQSEDMIESVKLSNHTLPYMIHGLGIPYLATYFILTTKHIIMAVPYGP 400 
WD40-rpts                                                                                      

Query      401 EDGIRWRLKYKLYDEALDMAKHNADLLSKTDLSPKKVGRMIIEGYLTGKRARAAASRLPLICGECKEEWEWAVNQFEEVK 480 
WD40-rpts                                                                                      

Query      481 LCTLLAEVLPDGTPTLDPECYQKVLIACLFNNVKQFRKLVQTWSPDLYMTSFIIDRTQWRIQQISKSGNLADVDETERVL 560 
WD40-rpts                                                                                      

Query      561 MDALAHLYLYERKYESALKILMSCQDFQIFNVIDKHQLFDLVKDQITELMNINSERALRLLLDNADSVEPSFVMEKIGRQ 640 
WD40-rpts                                                                                      

Query      641 PKLQLAYLTKLMSRNEGTEFADKAVQLYAEYDQKKLLPFLRKNANYNVNKARKLCSDKGYIEETIYLLAKSGNHYDAVKM 720 
WD40-rpts                                                                                      

Query      721 MVREYRNMEKVIDYCKDQNDPDLWIHLLGVVAEFPAHFSQLIIEASNCLDPLLIMDKLPDDSDIPNLSEALDKLLVDYTN 800 
WD40-rpts                                                                                      

Query      801 HAELQQCCYDSTLNDLNVLTQGLISAADESVSVNIVSRCSLCAQIIINSNQETTKKFSDIKVFKCGHIFHLACSTSEMER 880 
WD40-rpts                                                                                      

Query      881 RQSIEEGLCIACSDQIELINV 901 
WD40-rpts                           

2 WD40-repeats found in QUERY=F32A6.3c (Len=901):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1    46-83       2.86  232.80  0.04444       20.0%     37.83
  WD 2:  Seg  4    84-128      5.03  322.60  0.00279       25.0%     38.19

Multiple sequence alignment of 2 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   46-83     LK-----GEETLPFMKTATFTSIDLHD--KFIAIGTATGLIYILD
   WD 2   84-128    HHGYGNFDSVPPLKPHRCAVSKVKFDETGSYVLSCANDSKIVVSG

   WD40 Template    TG-----ECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD