Input parameters:

  Query = F26G5.9 (Len=944)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F26G5.9, Len=944):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MDIPGTSGTSNYQQWAHVVECPICYNIYDKPMQMGCGHTLCSTCIGRLVDQVKTNMAEELGRPRGPLLHPDDIGPGFGGL 80  
WD40-rpts                                                                                      

Query       81 GGFADQEDQPHFIDLPRLDPRMNPNDPNMVRGIVVLPRRGPEARATEIKCPECRKPTLVPADGLPVNYRVQEIVQKVAPL 160 
WD40-rpts                                                                                      

Query      161 FKDRHLVKLCNQCEAVLSQGVYFDCSQCEETGRKICSTCAIRLHNGHQLVEKKALTSDDVREMKQKISDASHAAFQSLEN 240 
WD40-rpts                                    (_________________________________________________

Query      241 LKPRLQSVGGTIEAKALDKLTSLIKIFEFMLSTFDSKIKENSTMDELMEEVKKAEKISKVYSEAGGRVDVMLTAIESAFN 320 
WD40-rpts      _______________________WD 1_____________________________________________________

Query      321 SYWDPFEKLKQEMGFQIDEPTGSVNQIPASEGGAERVNEVAAPAAGRPIPQNARNLRGALNHFAQVARNRNRQARGVQQQ 400 
WD40-rpts      __________________)                                                             

Query      401 QDLPFLPPPPPHQLVMPPPAMPPPQHMQAQRLWGGPQPQRMNQPMMAQVGGRPGQYIMGHPPPMHHQMQQGPPRMMYMHQ 480 
WD40-rpts                                                                                      

Query      481 QHHPMHQVEDQMQRQHQRMQQPNMNNIMHGNMQIAFQQHMHNNANVPMPPQMPAHPQQQQQQRHPNEGQQFQQGPPPPPP 560 
WD40-rpts                                                                                      

Query      561 QRIQNHQQQMQQYHQQLQVQQQQQPQPRAQPFRPPIQQQQQLQQIDLQAMNDRQFQQLADEIVAEDQMVQNAVDPAAPAD 640 
WD40-rpts                                                                                      

Query      641 IPRADWEEIQVAQRGAGDFGINFHPEPIVEEVEEEQPEVDQQVVVNGQVVENYRAGDINNVIHFEEVPVVLEPDVDGNVD 720 
WD40-rpts                                                                                      

Query      721 HNNGILENNVEEQEQFDDVPPQINNFVEFDDMREQVDAIEDEEFEPVLHRAAIEFQEAADQDALEQDVRERNLLDHEAEN 800 
WD40-rpts                                                                                      

Query      801 EEEDDGDLPYEEEDDEEEEVHVRNSVVRRRVQRPRDAAHISEVETRRSARRLARNSNNPTDEPSTSSGAAGPSNRPPHSP 880 
WD40-rpts                                                                                      

Query      881 TPPPGNKRRRVDRKPKTEEPEQMETEPVDPVHRAPKRRGTSAASSSSNGMPSSSAPTTRSQTRL 944 
WD40-rpts                                                                      

1 WD40-repeats found in QUERY=F26G5.9 (Len=944):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5   191-339      3.46  257.46  0.02092       22.5%      9.13

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1  191-339    TGRKICSTCAIRLHNGHQLVEKKALTSDDVREMKQKISDASHAAFQSLENLKPRLQSVGGTIEAKALDKLTSLIKIFEFMLSTFDSKIKENSTMDELMEEVKKAEKISKVYSEAGGRVDVMLTAIESAFNSYWDPFEKLKQEMGFQIDE

   WD40 Template    TGE------CLRTLSGHT----SGVTS-------------------------VSFSPDGKR--------------------------LVSGSE----------------------DG--------------------------TIKVWD