Input parameters:

  Query = F16F9.3b (Len=180)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F16F9.3b, Len=180):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MKFVYLSFLVIFLVICLALATEFESAESHNEDFHDEVDDADESMYSDGIEQYSDVATKLFSSLTPDTIKNHIKDIIRGFS 80  
WD40-rpts      (____________________________________________WD 1_______________________________

Query       81 DKGFEDCDKNADKYLVDEEVGCFIAEKMGFSLIGTLEQVIQHHDKDQNGKLDSDEVWSIVEEKDANLIEPLPSTIEQSMQ 160 
WD40-rpts      ____________)                                                                   

Query      161 LLNGFQEENVQPENPFLSYI 180 
WD40-rpts                          

1 WD40-repeats found in QUERY=F16F9.3b (Len=180):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-93       3.11  243.32  0.03226       15.0%     -2.94

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-93     MKFVYLSFLVIFLVICLALATEFESAESHNEDFHDEVDDADESMYSDGIEQYSDVATKLFSSLTPDTIKNHIKDIIRGFSDKGFEDCDKNADK

   WD40 Template    TGE------------------CLRTLSGHTSGVTSVSFSPDGKR------------------LV-----------------SGSEDGTIKVWD