Input parameters:

  Query = F15G9.6 (Len=88)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F15G9.6, Len=88):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MADLTKLVRTLSPEISGSTTISSLATTTTSSVSPNCDYVTQKKYIRNRRLVTRTDVRSRMSVWVRLFAWCRGGNKAQEEN 80  
WD40-rpts      (______________________________________WD 1_____________________________________

Query       81 GTIFTMRS 88  
WD40-rpts      )       

1 WD40-repeats found in QUERY=F15G9.6 (Len=88):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-81       3.86  274.27  0.01247       22.5%      8.80

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-81     MADLTKLVRTLSPEISGSTTISSLATTTTSSVSPNCDYVTQKKYIRNRRLVTRTDVRSRMSVWVRLFAWCRGGNKAQEENG

   WD40 Template    TG--------------ECLRTLSGHTSGVTSVSFSPD---------GKRLVS------------------GSEDGTIKVWD