Input parameters:

  Query = F08A10.1e (Len=669)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (F08A10.1e, Len=669):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MSASPMLQHMYSLDESSLMGVSHHSPYRQQRKRRAGISGAATGGSHQRDGPFACAGGNGYSSAGFSNGRGFPPLGGRSPQ 80  
WD40-rpts      (______________________________WD 1______________________________)              

Query       81 SSFDSNQDVAQKMMIPRGRTGSRIDLLDPVLRGQKPRRKRVDYDQISMNWMRMNGLGPSLRPFLNSGNHTPKKTVIHNSQ 160 
WD40-rpts                                                                                      

Query      161 STNHISRIGSLRRMHAADASIDGKLSLSGTQGDVAAACGETASRKSVSIAYSNDLEAGGKGNGAIGDDSTVPLMDEKDDN 240 
WD40-rpts                                                                                      

Query      241 SGGRLIRREILHEKRRHVSDRALAFAIMGIILMIIENELRTAYVIRPGSSLSHLLKFFIIFTTTALLSFVGYFHVIEIQL 320 
WD40-rpts                                                                                      

Query      321 FMNANAADDWMVALSFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNVFLSIMMFFRLYWLCRVMLLHSRV 400 
WD40-rpts                                                                                      

Query      401 FTDASSRSIAGLNRVNFNARFILKTLMTICPGTMLMIFTAFLWIIAGWILRLCEREYMTPDKYNDINYVNSIWLVAITFL 480 
WD40-rpts                                                                                      

Query      481 SVGYGDIVPKTNCGRSMAIVTGILGTCASSMVVAVIARKLELTRAEKHVHNFMQDTQLTKQLKHSAANVLRETWFIFKFR 560 
WD40-rpts                                                                                      

Query      561 KLVEKPDFGKIRKHQRKFLLAIYEMRRVRRDQRKLAENLVSLGDVAKTSSNTYELVHDVHSTQEGLSLRITAIEHQLSDI 640 
WD40-rpts                                                                                      

Query      641 SRELSSLAELLRGSVIITSDQMSNERKVS 669 
WD40-rpts                                   

1 WD40-repeats found in QUERY=F08A10.1e (Len=669):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-66       2.78  229.37  0.04932       20.0%     -5.33

Multiple sequence alignment of 1 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-66     MSASPMLQHMYSLDESSLMGVSHHSPYRQQRKRRAGISGAATGGSHQRDGPFACAGGNGYSSAGFS

   WD40 Template    TGEC-------------LRTLSGHT-------------SGVTSVSFSPDGKRLVSGSEDGTIKVWD