Input parameters:
Query = ENSP00000430925 (Len=120)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000430925, Len=120):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTI 80
WD40-rpts (_________________________________________________________WD 1__________________
Query 81 DFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE 120
WD40-rpts _______________________________________)
1 WD40-repeats found in QUERY=ENSP00000430925 (Len=120):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-120 3.12 243.52 0.03206 27.5% -20.39
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-120 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAE
WD40 Template TGECLRTLS-----------GHT----------------SGVTS--------------VS-------------FSPDGKRL-----------VSGS---------------EDGTIKVWD