Input parameters:
Query = ENSP00000430082 (Len=95)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000430082, Len=95):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRRRQANLLKGKQLLREGKVSEARECFT 80
WD40-rpts (_____________________________________________WD 1______________________________
Query 81 RSINITHAMAHKVIK 95
WD40-rpts ______________)
1 WD40-repeats found in QUERY=ENSP00000430082 (Len=95):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-95 2.89 234.14 0.04268 20.0% 5.99
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-95 MGIQGLLQFIKEASEPIHVRKYKGQVVAVDTYCWLHKGAIACAEKLAKGEPTDRRRQANLLKGKQLLREGKVSEARECFTRSINITHAMAHKVIK
WD40 Template TG--------------ECLRTLSGHTSGVTSVSFSPDGKRLV-----SGSED-----------------GT-----------IKVW--------D