Input parameters:
Query = ENSP00000429602 (Len=204)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000429602, Len=204):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKT 80
WD40-rpts (__________________________________________________________________
Query 81 VDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKD 160
WD40-rpts _________WD 1___________________________________________________________________
Query 161 LCEKNKQDLDINNITTYKKNIMALSDGGKLYRTDLALILCAGDN 204
WD40-rpts _______)
1 WD40-repeats found in QUERY=ENSP00000429602 (Len=204):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 14-168 2.94 236.25 0.04002 25.0% 0.34
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 14-168 GKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQD
WD40 Template GECL--------RT----------LS----------------GHTSGVT-----------------SVS----------------FSPDGKRL--------------------VSGS------------EDGTIKVW-----------------D