Input parameters:
Query = ENSP00000429522 (Len=116)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000429522, Len=116):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTI 80
WD40-rpts (_____________________________________________________WD 1______________________
Query 81 DFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYI 116
WD40-rpts ______________________________)
1 WD40-repeats found in QUERY=ENSP00000429522 (Len=116):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-111 3.12 243.53 0.03206 27.5% -22.10
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-111 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLD
WD40 Template TGECLRTLS-----------GHT--------------SGVTSVS----------FSPDGK-------------RLVSGSED-----------GTIK------------VWD