Input parameters:
Query = ENSP00000429279 (Len=132)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000429279, Len=132):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAGAGGGNDIQWCFSQVKGAVDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSH 80
WD40-rpts (________________WD 1________________)
Query 81 EPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNVQAGFSDSLPKNRIWQG 132
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000429279 (Len=132):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 19-56 3.39 254.84 0.02267 15.0% 29.82
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 19-56 GA--VDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQ
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD