Input parameters:

  Query = ENSP00000427692 (Len=589)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000427692, Len=589):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MNLHQVLTGAVNPGDHCFSVGSIGDQRFTAYASGCDIVILGSDFERLQIIPGAKHGNIQVGCVDCSMQQGKIAASYGNVI 80  
WD40-rpts                                                 (__________________WD 1______________

Query       81 SIFEPVNLPKQKKNLELYSQWQKSGQFFLESIAHNITWDPTGSRLLTGSSYLQLWSNTNLEKPTEDENLNKTDLNFGDWK 160 
WD40-rpts      ____)              (________________WD 2_______________)                        

Query      161 CIWHCKTASQVHLMKFSPDGEFFATAGKDDCLLKVWYNVENWRTAVTSPDGSSEKQSQGEIDFSFVYLAHPRAVNGFSWR 240 
WD40-rpts           (_____________WD 3_____________)         (____________________________WD 4_

Query      241 KTSKYMPRASVCNVLLTCCKDNVCRLWVETFLPNDCLLYGGDCSHWTESINLTNNFKRNASSKERVQNALEVNLRHFRRG 320 
WD40-rpts      ___________________________)                                                    

Query      321 RRRSLALVAHTGYLPHQQDPHHVHRNTPLHANALCHFHIAASINPATDIPLLPSITSLSLNENEEKTGPFVVHWLNNKEL 400 
WD40-rpts                                                                                      

Query      401 HFTLSMEVFLQQLRKSFEQPSSEASVEDSNQADVKSDEETDDGVDDLKINPEKKELGCDKMVPNSSFTSLSSAAIDHQIE 480 
WD40-rpts                                                                                      

Query      481 VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDANSLCKSIMMYACTKNVDLAIQ 560 
WD40-rpts                                                                                      

Query      561 QGKQKPSGLTRSTSMLISSGHNKSSNSLK 589 
WD40-rpts                                   

4 WD40-repeats found in QUERY=ENSP00000427692 (Len=589):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  5    44-85       3.86  274.01  0.01257       17.5%     49.87
  WD 2:  Seg  9   100-136      4.44  297.96  0.00599       20.0%     36.10
  WD 3:  Seg 13   166-197      4.46  298.81  0.00584       30.0%     31.39
  WD 4:  Seg 17   207-268      4.53  301.69  0.00534       20.0%     49.03

Multiple sequence alignment of 4 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1   44-85     -F-------------ERLQIIPGAKHGNIQVGCVDCSMQQGK---------IAA-SYGNVISIFEP
   WD 2  100-136    QW-------------Q-KSGQFFLESI---AHNITWDPTGSR---------LLT-GS--SYLQLWS
   WD 3  166-197    ----------------------KTASQ---VHLMKFSPDGEF---------FATAGKDDCLLKVWY
   WD 4  207-268    TSPDGSSEKQSQGEIDFSFVYLAHPRA---VNGFSWRKTSKYMPRASVCNVLLT-CCKDNVCRLWV

   WD40 Template    TG-------------ECLRTLSGHTSG---VTSVSFSPDGKR---------LVS-GSEDGTIKVWD