Input parameters:
Query = ENSP00000427291 (Len=140)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000427291, Len=140):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTTDLSFVTGSHVGELIIWDALDWTMQAYERNFWDPSPQLDTQQEIKLCQKSNDISIHHFTCDEENVFAAVGRGLYVYSL 80
WD40-rpts (_____________WD 1_____________)
Query 81 QMKRVIACQKTAHDSNVLHVARLPNRQLISCSEDGSVRIWELREKQQLAAEPVPTGFFNM 140
WD40-rpts (_________________WD 2________________)
2 WD40-repeats found in QUERY=ENSP00000427291 (Len=140):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 4 48-79 3.64 264.97 0.01660 12.5% 41.33
WD 2: Seg 7 83-121 7.89 440.66 7.2e-05 17.5% 49.64
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 48-79 ------LCQKSNDISIHHFTCDEENVFAAVGRG-LYVYS
WD 2 83-121 KRVIACQKTAHDSNVLHVARLPNRQLISCSEDGSVRIWE
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD