Input parameters:
Query = ENSP00000427061 (Len=67)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000427061, Len=67):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGNESSSVACLGHAAGQ 67
WD40-rpts (__________WD 1__________) (________________WD 2________________)
2 WD40-repeats found in QUERY=ENSP00000427061 (Len=67):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-26 3.61 263.88 0.01717 17.5% 40.32
WD 2: Seg 3 30-67 5.75 352.02 0.00112 27.5% 40.42
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-26 ------------XINDIAFKPDGTQLILAAGS-RLLVYD
WD 2 30-67 GTLLQPLKGHKDTVYCVAYAKDGNESSSVACLGHA-AGQ
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD