Input parameters:
Query = ENSP00000427054 (Len=107)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000427054, Len=107):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MDLRTDFIITASHDGHVKFWKKIEEGIEFVKHFRSHLGVIESIAVSSEGALFCSVGDDKAMKVFDVVNFDMINMLKLGYF 80
WD40-rpts (_________________WD 1________________)
Query 81 PGQCEWIYCPGDAISSVAASEKSTGKI 107
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000427054 (Len=107):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 27-65 8.63 471.15 2.8e-05 25.0% 55.94
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 27-65 IEFVKHFRSHLGVIESIAVSSEGALFCSVGDDKAMKVFD
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD