Input parameters:
Query = ENSP00000427027 (Len=69)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000427027, Len=69):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDVETGFHRVGQDGLDLLTS 69
WD40-rpts (__________WD 1__________) (_________________WD 2_________________)
2 WD40-repeats found in QUERY=ENSP00000427027 (Len=69):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-26 3.63 264.52 0.01684 17.5% 39.92
WD 2: Seg 4 30-69 7.31 416.80 0.00015 25.0% 48.34
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-26 ------------XINDIAFKPDGTQ-LILAAGS-RLLVYD
WD 2 30-69 GTLLQPLKGHKDTVYCVAYAKDVETGFHRVGQDGLDLLTS
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKR-LVSGSEDGTIKVWD