Input parameters:
Query = ENSP00000426855 (Len=158)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000426855, Len=158):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLRWLIGGGREPQGLAEKSPLQTIGEEQTQNPYTELLVLKAHHDIVRFLVQLDDYRFASAGDDGIVVVWNAQTGEKLLEL 80
WD40-rpts (___________WD 1___________) (________________WD 2________________) (______
Query 81 NGHTQKITAIITFPSLESCEEKNQLILTASADRTVIVWDGDTTRQVQRISCFQSTVKCLTVLQRLDVWLSGGNDLCVY 158
WD40-rpts ______________WD 3____________________) (_______________WD 4_______________)
4 WD40-repeats found in QUERY=ENSP00000426855 (Len=158):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 1-28 3.21 247.21 0.02865 15.0% 27.02
WD 2: Seg 3 33-70 7.35 418.34 0.00014 27.5% 53.19
WD 3: Seg 7 74-119 8.73 475.19 2.5e-05 37.5% 56.09
WD 4: Seg 10 123-158 5.01 321.57 0.00288 15.0% 44.69
Multiple sequence alignment of 4 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 1-28 MLR----------WLIGGGREPQ-------G--LAEKSPLQTIGEEQ
WD 2 33-70 -YTELLVLKAHHDIVRFL-VQLD-------DYRFASAGDDGIVVVWN
WD 3 74-119 -GEKLLELNGHTQKITAIITFPSLESCEEKNQLILTASADRTVIVWD
WD 4 123-158 -TRQVQRISCFQSTVKCLTVLQR-------LDVWLSGGNDLCVY---
WD40 Template TGECLRTLSGHTSGVTSVSFSPD-------GKRLVSGSEDGTIKVWD