Input parameters:
Query = ENSP00000426708 (Len=101)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000426708, Len=101):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ 80
WD40-rpts (________________WD 1________________) (_________________WD 2__
Query 81 TLFAGYTDNLVRVWQVTIGTR 101
WD40-rpts ______________)
2 WD40-repeats found in QUERY=ENSP00000426708 (Len=101):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 2 7-44 6.84 397.11 0.00028 32.5% 54.47
WD 2: Seg 6 57-95 7.97 444.03 6.4e-05 25.0% 45.32
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 7-44 EGKHLYTLDGGDI-INALCFSPNRYWLCAAT-GPSIKIWD
WD 2 57-95 -EVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD