Input parameters:
Query = ENSP00000426509 (Len=151)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000426509, Len=151):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MAADGRLVFAAYGNVFSAFARNKEIVHTFKGHKAEIHFLQPFGDHIISVDTDGILIIWHIYSEEEYLQLTFDKSVFKISA 80
WD40-rpts (________________WD 1_______________) (_________________
Query 81 ILHPSTYLNKILLGSEQGSLQLWNVKSNKLLYTFPGWKVGVTALQQAPAVDVVAIGLMSGQVIIHNIKFNE 151
WD40-rpts _WD 2__________________) (_________________WD 3________________)
3 WD40-repeats found in QUERY=ENSP00000426509 (Len=151):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 23-59 7.87 439.82 7.3e-05 25.0% 50.99
WD 2: Seg 7 63-104 6.17 369.50 0.00065 25.0% 57.83
WD 3: Seg 11 108-146 9.07 489.38 1.6e-05 22.5% 58.85
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 23-59 KEIVHTFKGHKAEI-HFL--QPFG--DHIISVDTDGILIIWH
WD 2 63-104 EEEYLQLTFDKSVFKISAILHPSTYLNKILLGSEQGSLQLWN
WD 3 108-146 NKLLYTFPGWKVGV-TALQQAPAV--DVVAIGLMSGQVIIHN
WD40 Template GECLRTLSGHTSGV-TSVSFSPDG--KRLVSGSEDGTIKVWD