Input parameters:
Query = ENSP00000426497 (Len=106)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000426497, Len=106):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 DLVAGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLTVNSDGVLVSGDRRNSSS 80
WD40-rpts (_________________WD 1________________) (________________WD 2______________
Query 81 QLETRNYQEKEILMNVEFFLSLFFSF 106
WD40-rpts __)
2 WD40-repeats found in QUERY=ENSP00000426497 (Len=106):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 4-42 8.68 473.34 2.6e-05 35.0% 53.19
WD 2: Seg 5 46-83 8.16 451.93 5.0e-05 27.5% 55.31
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 4-42 AGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPD-NIKQWK
WD 2 46-83 -GSFIQNLSGHNAIINTLTVNSDGV-LVSGDRRNSSSQLE
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD