Input parameters:
Query = ENSP00000426304 (Len=137)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000426304, Len=137):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MDRTCEERPAEDGSDEEDPDSMEAPTRIRDTPEDIVLEAPASGLAFHPARDLLAAGDVDGDVFVFSYSCQEGETKELWSS 80
WD40-rpts (_____________WD 1_____________) (______
Query 81 GHHLKACRAVAFSEDGQSEYWGRQPAMWWKGAVSSTMTWAPFPQSSLLSPRTKPSMF 137
WD40-rpts ___________WD 2________________)
2 WD40-repeats found in QUERY=ENSP00000426304 (Len=137):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 35-66 5.34 335.29 0.00188 17.5% 38.48
WD 2: Seg 4 74-112 6.44 380.75 0.00046 20.0% 42.98
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 35-66 -------IVLEAPASGLAFHPARDLLAAGDVDGDVFVFS
WD 2 74-112 TKELWSSGHHLKACRAVAFSEDGQSEYWGRQPAMWWKGA
WD40 Template GECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD