Input parameters:
Query = ENSP00000426101 (Len=233)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000426101, Len=233):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 MTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 80
WD40-rpts (__________________WD 1_________________) (_________________WD 2______
Query 81 GSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNS 160
WD40-rpts __________) (_________________WD 3________________) (__________________WD 4
Query 161 SNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKTLFAGYTDNLVRVWQVTIGTR 233
WD40-rpts _________________) (____________________WD 5____________________)
5 WD40-repeats found in QUERY=ENSP00000426101 (Len=233):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 4-44 8.77 476.83 2.3e-05 32.5% 53.03
WD 2: Seg 5 53-91 10.17 534.57 3.9e-06 45.0% 52.89
WD 3: Seg 9 95-133 10.92 565.66 1.5e-06 50.0% 52.79
WD 4: Seg 13 138-178 7.99 444.51 6.4e-05 30.0% 53.52
WD 5: Seg 17 182-227 8.13 450.61 5.3e-05 32.5% 47.82
Multiple sequence alignment of 5 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 4-44 QMTLRGTLKGHNGWVTQIATTPQFPDM--ILSASR-------DKTIIMWK
WD 2 53-91 -GIPQRALRGHSHFVSDVVISSD-GQF--ALSGSW-------DGTLRLWD
WD 3 95-133 -GTTTRRFVGHTKDVLSVAFSSD-NRQ--IVSGSR-------DKTIKLWN
WD 4 138-178 -CKYTVQDESHSEWVSCVRFSPN-SSNPIIVSCGW-------DKLVKVWN
WD 5 182-227 -CKLKTNHIGHTGYLNTVTVSPD-GSL--CASGGKTLFAGYTDNLVRVWQ
WD40 Template TGECLRTLSGHTSGVTSVSFSPD-GKR--LVSGSE-------DGTIKVWD