Input parameters:
Query = ENSP00000425914 (Len=156)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000425914, Len=156):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 80
WD40-rpts (_________________WD 1_________________) (_________________WD 2_________
Query 81 DSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNHKKSVRAVVLHPRQ 156
WD40-rpts _______) (_________________WD 3________________)
3 WD40-repeats found in QUERY=ENSP00000425914 (Len=156):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 1 7-46 9.86 522.05 5.7e-06 37.5% 58.40
WD 2: Seg 5 50-88 9.87 522.24 5.7e-06 32.5% 56.92
WD 3: Seg 9 92-130 10.30 540.29 3.2e-06 37.5% 55.42
Multiple sequence alignment of 3 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 7-46 SGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWD
WD 2 50-88 -NKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWD
WD 3 92-130 -KASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWD
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD