Input parameters:
Query = ENSP00000425852 (Len=147)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000425852, Len=147):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 XYILSGSRDATLLLWYWNGKCSGIGDNPGSETAAPRAILTGHDYEVTCAAVCAELGLVLSGSQEGPCLIHSMNGDLLRTL 80
WD40-rpts (_________________WD 1________________)
Query 81 EGPENCLKPKLIQASREGHCVIFYENGLFCTFSVNGKLQATMETDDNIRVHHFWHGFRKHCAILQRL 147
WD40-rpts (________________WD 2________________)
2 WD40-repeats found in QUERY=ENSP00000425852 (Len=147):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 33-71 7.68 431.78 9.4e-05 22.5% 54.77
WD 2: Seg 9 95-132 4.61 305.16 0.00480 20.0% 49.38
Multiple sequence alignment of 2 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 33-71 -AAPRAILTGHDYEVTCAAVCAELGLVLSGSQEGPCLIHS
WD 2 95-132 SREGHCVIFYENG--LFCTFSVNGKLQATMETDDNIRVHH
WD40 Template TGECLRTLSGHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD