Input parameters:

  Query = ENSP00000425841 (Len=387)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000425841, Len=387):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MERSGPSEVTGSDASGPDPQLAVTMGFTGFGKKARTFDLEAMFEQTRRTAVERSRKTLEAREKEEEMNREKELRRQNEDI 80  
WD40-rpts      (___________________________________WD 1__________________________________)(____

Query       81 EPTSSRSNVVRDCSKSSSRDTSSSESEQSSDSSDDELIGPPLPPKMVGKPVNFMEEDILGPLPPPLNEEEEEAEEEEEEE 160 
WD40-rpts      ______________WD 2__________________)                                           

Query      161 EEEENPVHKIPDSHEITLKHGTKTVSALGLDPSGARLVTGGYDYDVKFWDFAGMDASFKAFRSLQPCECHQIKSLQYSNT 240 
WD40-rpts                        (_____________WD 3_____________)(_____________________WD 4____

Query      241 GDMILVVSGSSQAKVIDRDGFEVMECIKGDQYIVDMANTKGHTAMLHTGSWHPKIKGEFMTCSNDATVRTWEVENPKKQK 320 
WD40-rpts      ________________)           (___________________WD 5___________________)(_______

Query      321 SVFKPRTMQGKKVIPTTCTYSRDGNLIAAACQNGSIQIWDRNLTSNKLRLSYGTVCMLWAHTEVCVM 387 
WD40-rpts      ______________WD 6_____________________)                           

6 WD40-repeats found in QUERY=ENSP00000425841 (Len=387):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-75       4.71  309.05  0.00425       17.5%      3.45
  WD 2:  Seg  3    76-117      6.29  374.61  0.00056       15.0%     -17.75
  WD 3:  Seg  5   179-210      7.94  442.62  6.7e-05       30.0%     44.61
  WD 4:  Seg  8   211-257      7.18  411.33  0.00018       17.5%     52.55
  WD 5:  Seg 13   269-312      7.78  436.16  8.2e-05       25.0%     43.30
  WD 6:  Seg 17   313-360      8.89  481.74  2.0e-05       27.5%     44.23

Multiple sequence alignment of 6 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-75     --------------------M--ERSGPSEVTGSDASGPDPQ-LAVTMGFTGFGKKARTFDLEAMFEQTRRTAVERSRKTLEAREKEEEMNREKELRR
   WD 2   76-117    QN-------E--------DIEPTSSRSNVVRDCSKSSSRDTS-SSESE---QSSDSSDDEL-------------------------------------
   WD 3  179-210    -------------------------KHGTKTVSALGLDPSGA-RLVTG---GYDYDVKFWD-------------------------------------
   WD 4  211-257    FAGMDASFKA--------FRS--LQPCECHQIKSLQYSNTGD-MILVV---SGSSQAKVID-------------------------------------
   WD 5  269-312    GD-------Q-----YIVDMA--NTKGHTAMLHTGSWHPKIKGEFMTC---SNDATVRTWE-------------------------------------
   WD 6  313-360    VE-------NPKKQKSVFKPR--TMQGKKVIPTTCTYSRDGN-LIAAA---CQNGSIQIWD-------------------------------------

   WD40 Template    TG-------E--------CLR--TLSGHTSGVTSVSFSPDGK-RLVSG---SEDGTIKVWD-------------------------------------