Input parameters:
Query = ENSP00000425563 (Len=163)
Tmplt = WD40-str (Len=40)
Method = bdp Gap-open = 50 Gap-extend = 3
Database = /home/pub/blastdb/nr90 E-value = 0.001 Iteration = 3
Query sequence (ENSP00000425563, Len=163):
(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query 1 GISALVEIPKNCVVAAVGKELIIFRLVAPTEGSLEWDILEVKRLLDHQDNILSLINVNDLSFVTGSHVGELIIWDALDWT 80
WD40-rpts (__________________________WD 1__________________________)
Query 81 MQAYERNFWDPSPQLDTQQEIKLCQKSNDISIHHFTCDEENVFAAVGRGLYVYSLQMKRVIACQKTAHDSNVLHVARLPN 160
WD40-rpts
Query 161 RFF 163
WD40-rpts
1 WD40-repeats found in QUERY=ENSP00000425563 (Len=163):(Red - Z-score>4.0)
Rpts Segment Boundary Z-score Score P-value Identities SS-score
WD 1: Seg 3 18-75 4.50 300.38 0.00556 25.0% 26.70
Multiple sequence alignment of 1 WD40-repeats:(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)
WD 1 18-75 GKELIIFRLVAPTEGSLEWDILEVKRLLDHQDNILSL-INVNDLSFVTGSHVGELIIWD
WD40 Template TGECL---------RTLS----------GHTSGVTSVSFSPDGKRLVSGSEDGTIKVWD