Input parameters:

  Query = ENSP00000425536 (Len=1234)
  Tmplt = WD40-str (Len=40)
  Method = bdp  Gap-open = 50  Gap-extend = 3
  Database = /home/pub/blastdb/nr90  E-value = 0.001  Iteration = 3

Query sequence (ENSP00000425536, Len=1234):

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

                       10        20        30        40        50        60        70        80
               ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
Query        1 MRAVLTWRDKAEHCINDIAFKPDGTQLILAAGSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIW 80  
WD40-rpts      (_________________WD 1________________)   (_________________WD 2________________

Query       81 TSKLEGILKYTSWSVMSSLHLHLPFLGLHKTVRVTATDKAPKGQGGRIDCLRPSVQNQPGQKHNDAIQCVSYNPITHQLA 160 
WD40-rpts      )(___________________WD 3___________________)        (________________WD 4______

Query      161 SCSSSDFGLWSPEQKSVSKHKSSSKIICCSWTNDGQYLALGMFNGIISIRNKNGEEKVKIERPGGSLSPIWSICWNPSRE 240 
WD40-rpts      __________)(_________________WD 5_________________)(_____________________WD 6___

Query      241 ERNDILAVADWGQKVSFYQLSGKQIGKDRALNFDPCCISYFTKGEYILLGGSDKQVSLFTKDGVRLGTVGEQNSWVWTCQ 320 
WD40-rpts      __________________)  (_________________WD 7________________)  (_________________

Query      321 AKPDSNYVVVGCQDGTISFYQLIFSTVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCKELVKKIAIYRNRLAIQLPEK 400 
WD40-rpts      WD 8________________)                                                           

Query      401 ILIYELYSEDLSDMHYRVKEKIIKKFECNLLVVCANHIILCQEKRLQCLSFSGVKEREWQMESLIRYIKVIGGPPGREGL 480 
WD40-rpts                                                         (__________________WD 9______

Query      481 LVGLKNGQILKIFVDNLFAIVLLKQATAVRCLDMSASRKKLAVVDENDTCLVYDIDTKELLFQEPNANSVAWNTQCEDML 560 
WD40-rpts      ____________) (_________________WD10_________________)                          

Query      561 CFSGGGYLNIKASTFPVHRQKLQGFVVGYNGSKIFCLHVFSISAVEVPQSAPMYQYLDRKLFKEAYQIACLGVTDTDWRE 640 
WD40-rpts                                                                                      

Query      641 LAMEALEGLDFETAKKAFIRVQDLRYLELISSIEERKKRGETNNDLFLADVFSYQGKFHEAAKLYKRSGHENLALEMYTD 720 
WD40-rpts                                                                                      

Query      721 LCMFEYAKDFLGSGDPKETKMLITKQADWARNIKEPKAAVEMYISAGEHVKAIEICGDHGWVDMLIDIARKLDKAEREPL 800 
WD40-rpts                                                                                      

Query      801 LLCATYLKKLDSPGYAAETYLKMGDLKSLVQLHVETQRWDEAFALGEKHPEFKDDIYMPYAQWLAENDRFEEAQKAFHKA 880 
WD40-rpts                                                                                      

Query      881 GRQREAVQVLEQLTNNAVAESRFNDAAYYYWMLSMQCLDIAQADPAQKDTMLGKFYHFQRLAELYHGYHAIHRHTEDPFS 960 
WD40-rpts                                                                                      

Query      961 VHRPETLFNISRFLLHSLPKDTPSGISKVKILFTLAKQSKALGAYRLARHAYDKLRGLYIPARFQKSIELGTLTIRAKPF 1040
WD40-rpts                                                                                      

Query     1041 HDSEELVPLCYRCSTNNPLLNNLGNVCINCRQPFIFSASSYDVLHLVEFYLEEGITDEEAISLIDLEVLRPKRDDRQLEI 1120
WD40-rpts                                                                                      

Query     1121 ANNSSQILRLVETKDSIGDEDPFTAKLSFEQGGSEFVPVVVSRLVLRSMSRRDVLIKRWPPPLRWQYFRSLLPDASITMC 1200
WD40-rpts                                                                                      

Query     1201 PSCFQMFHSEDYELLVLQHGCCPYCRRCKDDPGP 1234
WD40-rpts                                        

10 WD40-repeats found in QUERY=ENSP00000425536 (Len=1234):

(Red - Z-score>4.0)

  Rpts  Segment   Boundary  Z-score   Score  P-value  Identities  SS-score
  WD 1:  Seg  1     1-39       6.63  388.39  0.00036       20.0%     52.47
  WD 2:  Seg  5    43-81       8.96  484.92  1.8e-05       40.0%     54.51
  WD 3:  Seg  9    82-125      5.26  332.10  0.00208       15.0%     33.76
  WD 4:  Seg 12   134-171      4.40  296.57  0.00626       20.0%     45.62
  WD 5:  Seg 15   172-211      6.61  387.55  0.00037       20.0%     54.59
  WD 6:  Seg 19   212-259      3.51  259.49  0.01966       12.5%     48.07
  WD 7:  Seg 23   262-300      5.31  334.04  0.00196       12.5%     54.90
  WD 8:  Seg 27   303-341      6.84  397.07  0.00028       32.5%     56.06
  WD 9:  Seg 42   452-493      3.76  270.15  0.01416       17.5%     51.67
  WD10:  Seg 46   495-534      6.21  371.28  0.00062       22.5%     54.70

Multiple sequence alignment of 10 WD40-repeats:

(BLUE - beta-strands, RED - alpha-helices, predicted by PSIPRED)

   WD 1    1-39     MR----A----VLT--WRDKAEHCINDIAFKPDGTQ----LILAAGS-RLLVYD
   WD 2   43-81     -G----T----LLQ--PLKGHKDTVYCVAYAKDGKR----FASGSADKSVIIWT
   WD 3   82-125    SK----LEGILKYT--SWSVMSSLHLHLPFLGLHKT----VRVTATDKAPKGQG
   WD 4  134-171    -S----V----QNQ--PGQKHNDAIQCVSYNPITHQ----LASCS-SSDFGLWS
   WD 5  172-211    PE----Q----KSV--SKHKSSSKIICCSWTNDGQY----LALGMFNGIISIRN
   WD 6  212-259    KNGEEKV----KIE--RPGGSLSPIWSICWNPSREERNDILAVADWGQKVSFYQ
   WD 7  262-300    -G----K----QIG--KDRALNFDPCCISYFTKGEY----ILLGGSDKQVSLFT
   WD 8  303-341    -G----V----RLG--TVGEQNSWVWTCQAKPDSNY----VVVGCQDGTISFYQ
   WD 9  452-493    SG----V----KEREWQMESLIRYIKVIGGPPGREG----LLVGLKNGQILKIF
   WD10  495-534    DN----L----FAI--VLLKQATAVRCLDMSASRKK----LAVVDENDTCLVYD

   WD40 Template    TG----E----CLR--TLSGHTSGVTSVSFSPDGKR----LVSGSEDGTIKVWD